shRNA+Results

Features: Sequence alone.
 * || SVM: || Random Forest ||
 * Features || Sequence only || Sequence only ||
 * Kernel || RBF || 500 decision trees ||
 * AUC || 0.74 || 0.78 ||
 * || [[image:thapar/svmAUC_seqOnly.jpeg caption="Auc SVM"]] || [[image:thapar/RandomAUC_seqOnly.jpeg caption="AUC RF"]] ||
 * Auc SVM ||  ||   ||   ||
 * AUC RF ||  ||
 * Features || Sequence, windows with kmer counts & GorC counts ||  ||
 * Kernel || RBF || 500 decision trees ||
 * AUC || [[image:thapar/svmAUC_seq_window_Kmer_gc.jpeg caption="svmAUC_seq_window_Kmer_gc.jpeg"]] || [[image:thapar/RandomAUC_seq_window_Kmer_gc.jpeg caption="RandomAUC_seq_window_Kmer_gc.jpeg"]] ||
 * Features || Window with kmers || Windows with Kmers ||
 * Polydotkernet || [[image:thapar/svmAUC_window_Kmer.jpeg caption="svmAUC_window_Kmer.jpeg"]] || [[image:thapar/RandomAUC_window_Kmer.jpeg caption="RandomAUC_window_Kmer.jpeg"]] ||
 * Features || GorC GorT in 4 mer windows (c=4, cross-100, ksvm) ||  ||
 * rbfdot || [[image:thapar/svmAUC_GorCorT.jpeg caption="svmAUC_GorCorT.jpeg"]] || [[image:thapar/RandomAUC_GorCorT.jpeg caption="RandomAUC_GorCorT.jpeg"]] ||