ShrnaData

This is the Data page for the shRNA project

Currently we have three files in the dropbox folder labels.txt ranks.txt NIHMS284024-supplement-02 labels.txt (from christof)

How we create labels and ranks: I = shrna.original.intensities(:,1:12); %ignore the last two columns pos = sum(I(:,end-1:end)>0,2)>0; %positive examples passed the last sort in either chicken or human labels = 2*pos-1; ranks = sum(I>0,2); %the number of sorts an shrna passed

TODO: add the data file with the shrna processing steps.